FAM71E1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM71E1 mutation is significantly associated with the RNA expression of many other genes, with 575 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FAM71E1-associated genes across cancer lineages are RPL14P6, NIPA2P3, and CYCSP42. Each is linked with FAM71E1 in more than 1 cancer types. Because this analysis shows association rather than direction, both FAM71E1-to-partner and partner-to-FAM71E1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RPL14P6 grouped by FAM71E1-low versus FAM71E1-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM71E1→partner) and Y-score (partner→FAM71E1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADRPL14P6 →+0.205+3.798.005.00932
BLCANIPA2P3 →+0.029+7.640<.001.00931
PRADCYCSP42 →+0.089+7.939<.001.00831
UCECRNA5SP414 →+0.527+2.769.002.00231
UCECMRPL57P3 →+0.474+2.761.002.00131
UCECUHRF1 →+1.373+3.470<.001.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 575 associations by consensus.

RPL14P6 by FAM71E1 expression — COAD

Box plot of RPL14P6 in FAM71E1-low vs FAM71E1-high samples in COAD.

Explore this box plot interactively →

Exploration