FAM43B

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM43B RNA expression is significantly associated with the protein abundance of many other proteins, with 9,783 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible FAM43B-associated proteins across cancer lineages are MRPS5, PCOLCE, and CLEC11A. Each is linked with FAM43B in more than 5 cancer types. Because this analysis shows association rather than direction, both FAM43B-to-partner and partner-to-FAM43B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MRPS5 grouped by FAM43B-low versus FAM43B-high in BRCA.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM43B→partner) and Y-score (partner→FAM43B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAMRPS5 →-0.309-0.330<.001<.00136
BRCAPCOLCE →+0.820+0.408<.001<.00136
BRCACLEC11A →+0.725+0.285<.001.00536
HNSCFHL3 →+0.539+0.217<.001.00436
UCECNID2 →+0.583+0.530.005.00436
COADRSU1 →+0.345+0.119<.001.00235
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,783 associations by consensus.

MRPS5 by FAM43B expression — BRCA

Box plot of MRPS5 in FAM43B-low vs FAM43B-high samples in BRCA.

Explore this box plot interactively →

Exploration