FAM230I

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM230I mutation is significantly associated with the RNA expression of many other genes, with 253 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FAM230I-associated genes across cancer lineages are RN7SL126P, HNRNPCL3, and AQP7P3. Each is linked with FAM230I in more than 1 cancer types. Because this analysis shows association rather than direction, both FAM230I-to-partner and partner-to-FAM230I results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RN7SL126P grouped by FAM230I-low versus FAM230I-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM230I→partner) and Y-score (partner→FAM230I) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRN7SL126P →+0.218+2.496.003.00431
UCECHNRNPCL3 →+0.082+3.193<.001<.00131
UCECAQP7P3 →+0.053+3.997<.001.00131
UCECRN7SL134P →+0.138+2.599.002.00931
UCECMIR4744 →+0.384+2.377.007.00831
UCECMIR548AI →+0.235+4.414<.001.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 253 associations by consensus.

RN7SL126P by FAM230I expression — UCEC

Box plot of RN7SL126P in FAM230I-low vs FAM230I-high samples in UCEC.

Explore this box plot interactively →

Exploration