FAM228A

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM228A mutation is significantly associated with the RNA expression of many other genes, with 175 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FAM228A-associated genes across cancer lineages are CICP18, BPNT2P, and MIR7976. Each is linked with FAM228A in more than 1 cancer types. Because this analysis shows association rather than direction, both FAM228A-to-partner and partner-to-FAM228A results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM228A→partner) and Y-score (partner→FAM228A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADCICP18 →+0.025+4.426<.001.00632
READBPNT2P →+0.148+6.681<.001<.00132
UCECMIR7976 →+0.445+2.868.002.00631
UCECRPS29P32 →+0.642+3.014<.001.00431
UCECRN7SL478P →+0.339+2.939<.001.00131
BRCAWBP1LP3 →+0.148+7.731<.001.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 175 associations by consensus.

Exploration