FAM216B

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM216B mutation is significantly associated with the RNA expression of many other genes, with 45 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible FAM216B-associated genes across cancer lineages are MIR6515, LINC01737, and MIR6777. Each is linked with FAM216B in more than 1 cancer types. Because this analysis shows association rather than direction, both FAM216B-to-partner and partner-to-FAM216B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MIR6515 grouped by FAM216B-low versus FAM216B-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM216B→partner) and Y-score (partner→FAM216B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMIR6515 →+0.519+4.335<.001.00732
UCECLINC01737 →+0.299+4.335<.001.00732
SKCMMIR6777 →+0.423+4.199<.001.00931
SKCMHSPE1P22 →+0.121+3.490.001.00831
SKCMIGLVIVOR22-2 →+0.241+3.879.001.00431
SKCMMIR6752 →+0.340+4.199<.001.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 45 associations by consensus.

MIR6515 by FAM216B expression — UCEC

Box plot of MIR6515 in FAM216B-low vs FAM216B-high samples in UCEC.

Explore this box plot interactively →

Exploration