FAM216B

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, FAM216B RNA expression is significantly associated with the go_rna of many other GO terms, with 234 significant associations in total. LUNG_SCLC shows the largest number of these associations.

The most reproducible FAM216B-associated GO terms across cancer lineages are Late viral transcription, Regulation of ubiquitin-dependent protein catabolic process, and Negative regulation of protein modification process. Each is linked with FAM216B in more than 2 cancer types. Because this analysis shows association rather than direction, both FAM216B-to-partner and partner-to-FAM216B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Late viral transcription grouped by FAM216B-low versus FAM216B-high in BLOOD_Lymphoma.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM216B→partner) and Y-score (partner→FAM216B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaLate viral transcription →+0.077+0.042<.001.00833
BLOOD_LymphomaRegulation of ubiquitin-dependent protein catabolic process →+0.043+0.029<.001.00733
BLOOD_LymphomaNegative regulation of protein modification process →+0.044+0.042<.001.00633
BLOOD_LymphomaDetection of abiotic stimulus →-0.042-0.028<.001.00833
CNSRegulation of adherens junction organization →+0.075+0.043.003.00923
BLOOD_LymphomaRegulation of post-translational protein modification →+0.044+0.028<.001.00832
Each partner links to its Q-omics profile. Showing the 6 strongest of 234 associations by consensus.

Late viral transcription by FAM216B expression — BLOOD_Lymphoma

Box plot of Late viral transcription in FAM216B-low vs FAM216B-high samples in BLOOD_Lymphoma.

Explore this box plot interactively →

Exploration