FAM214B

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, FAM214B mutation is significantly associated with the RNA expression of many other genes, with 9 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible FAM214B-associated genes across cancer lineages are APOC4, PROP1, and NUPR2. Each is linked with FAM214B in more than 1 cancer types. Because this analysis shows association rather than direction, both FAM214B-to-partner and partner-to-FAM214B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, APOC4 grouped by FAM214B-low versus FAM214B-high in LUNG_NSCLC_LUAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM214B→partner) and Y-score (partner→FAM214B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUADAPOC4 →+0.050+5.266<.001.00131
BLOOD_LeukemiaPROP1 →+0.032+4.874<.001.00231
BLOOD_LeukemiaNUPR2 →+0.065+4.539<.001.00731
BLOOD_LeukemiaSPANXN1 →+0.097+4.152<.001.00931
LARGE_INTESTINEAVP →+0.050+3.632<.001<.00131
LARGE_INTESTINEPFN3 →+0.090+2.882<.001.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 9 associations by consensus.

APOC4 by FAM214B expression — LUNG_NSCLC_LUAD

Box plot of APOC4 in FAM214B-low vs FAM214B-high samples in LUNG_NSCLC_LUAD.

Explore this box plot interactively →

Exploration