FAM209A

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM209A protein abundance is significantly associated with the RNA expression of many other genes, with 19,580 significant associations in total. GBM shows the largest number of these associations.

The most reproducible FAM209A-associated genes across cancer lineages are TLR2, OSCAR, and C1QA. Each is linked with FAM209A in more than 8 cancer types. Because this analysis shows association rather than direction, both FAM209A-to-partner and partner-to-FAM209A results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, FAM209A versus TLR2 in GBM, with a Pearson correlation of 0.79.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM209A→partner) and Y-score (partner→FAM209A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMTLR2 →+1.272+0.710<.001<.00139
COADOSCAR →+0.929+0.726<.001<.00139
GBMC1QA →+1.390+0.665<.001<.00139
GBMHCK →+1.142+0.706<.001<.00138
GBMCCL8 →+1.316+0.507<.001<.00138
GBMPLAUR →+1.358+0.559<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 19,580 associations by consensus.

FAM209A vs TLR2 — GBM

Per-sample scatter of FAM209A vs TLR2 in GBM (Pearson r = 0.79).

Explore this scatter interactively →

Exploration