FAM197Y9

Across TCGA patient cohorts, FAM197Y9 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,165 significant associations in total. STAD shows the largest number of these associations.

The most reproducible FAM197Y9-associated GO terms across cancer lineages are Negative regulation of DNA biosynthetic process, snRNA metabolic process, and Obsolete regulation of dosage compensation by inactivation of X chromosome. Each is linked with FAM197Y9 in more than 4 cancer types. Because this analysis shows association rather than direction, both FAM197Y9-to-partner and partner-to-FAM197Y9 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Negative regulation of DNA biosynthetic process grouped by FAM197Y9-low versus FAM197Y9-high in TGCT.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM197Y9→partner) and Y-score (partner→FAM197Y9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
TGCT	Negative regulation of DNA biosynthetic process →	+0.025	+0.057	<.001	<.001	3	5
STAD	snRNA metabolic process →	+0.072	+0.016	<.001	<.001	3	4
STAD	Obsolete regulation of dosage compensation by inactivation of X chromosome →	+0.072	+0.016	<.001	<.001	3	4
STAD	U2-type prespliceosome assembly →	+0.095	+0.021	<.001	.001	3	4
STAD	Amino acid activation →	+0.071	+0.024	<.001	<.001	3	4
STAD	Macromolecule methylation →	+0.068	+0.025	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,165 associations by consensus.

Negative regulation of DNA biosynthetic process by FAM197Y9 expression — TGCT

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