FAM189B

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM189B mutation is significantly associated with the total protein of many other genes, with 13 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FAM189B-associated genes across cancer lineages are Fibronectin, JNK2, and Ku80. Each is linked with FAM189B in more than 1 cancer types. Because this analysis shows association rather than direction, both FAM189B-to-partner and partner-to-FAM189B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Fibronectin grouped by FAM189B-low versus FAM189B-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM189B→partner) and Y-score (partner→FAM189B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECFibronectin →-0.359-1.990.012.03031
UCECJNK2 →+0.248+2.834.004.03431
UCECKu80 →+0.241+2.179.019.03431
UCECNotch1 →+0.146+2.183.017.03331
UCECRab11 →-0.148-3.169.019.01831
UCECRad50 →-0.267-3.156.011.01831
Each partner links to its Q-omics profile. Showing the 6 strongest of 13 associations by consensus.

Fibronectin by FAM189B expression — UCEC

Box plot of Fibronectin in FAM189B-low vs FAM189B-high samples in UCEC.

Explore this box plot interactively →

Exploration