FAM189A1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM189A1 protein abundance is significantly associated with the RNA expression of many other genes, with 321 significant associations in total. GBM shows the largest number of these associations.

The most reproducible FAM189A1-associated genes across cancer lineages are PLAT, TFPI2, and ACTR3C. Each is linked with FAM189A1 in more than 1 cancer types. Because this analysis shows association rather than direction, both FAM189A1-to-partner and partner-to-FAM189A1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, FAM189A1 versus PLAT in GBM, with a Pearson correlation of -0.93.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM189A1→partner) and Y-score (partner→FAM189A1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMPLAT →-1.323-1.466.006.00131
GBMTFPI2 →+1.113+1.098.001.00231
GBMACTR3C →+1.001+1.098.001.00231
GBMNUP88 →-0.663-1.466.004.00131
GBMSLC6A4 →-0.373-0.949.002.00731
GBMASIC2 →+1.177+1.098.002.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 321 associations by consensus.

FAM189A1 vs PLAT — GBM

Per-sample scatter of FAM189A1 vs PLAT in GBM (Pearson r = -0.93).

Explore this scatter interactively →

Exploration