FAM189A1

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, FAM189A1 RNA expression is significantly associated with the go_rna of many other GO terms, with 1,627 significant associations in total. CNS shows the largest number of these associations.

The most reproducible FAM189A1-associated GO terms across cancer lineages are Dendritic spine maintenance, Negative regulation of myoblast fusion, and Interleukin-23-mediated signaling pathway. Each is linked with FAM189A1 in more than 5 cancer types. Because this analysis shows association rather than direction, both FAM189A1-to-partner and partner-to-FAM189A1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Dendritic spine maintenance grouped by FAM189A1-low versus FAM189A1-high in CNS.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM189A1→partner) and Y-score (partner→FAM189A1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CNSDendritic spine maintenance →+0.099+0.837<.001.00235
LUNG_SCLCNegative regulation of myoblast fusion →+0.066+0.666.001.00735
SKINInterleukin-23-mediated signaling pathway →+0.089+0.509.004.00626
LUNG_SCLCMitochondrial electron transport, ubiquinol to cytochrome c →+0.084+0.847<.001.00735
CNSAlpha-beta T cell activation →+0.053+0.669<.001<.00135
KIDNEYInterleukin-7-mediated signaling pathway →+0.210+1.759.001.00234
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,627 associations by consensus.

Dendritic spine maintenance by FAM189A1 expression — CNS

Box plot of Dendritic spine maintenance in FAM189A1-low vs FAM189A1-high samples in CNS.

Explore this box plot interactively →

Exploration