FAM174A

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM174A protein abundance is significantly associated with the RNA expression of many other genes, with 5,228 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible FAM174A-associated genes across cancer lineages are ELL2, RPIA, and PCSK6. Each is linked with FAM174A in more than 3 cancer types. Because this analysis shows association rather than direction, both FAM174A-to-partner and partner-to-FAM174A results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, FAM174A versus ELL2 in BRCA, with a Pearson correlation of 0.30.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM174A→partner) and Y-score (partner→FAM174A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAELL2 →+0.616+0.499.003.00334
COADRPIA →-0.546-0.373.005.00433
BRCAPCSK6 →+1.078+0.650<.001<.00133
BRCATEX30 →-0.650-0.492.001.00233
OVMPP2 →-0.715-0.529.004.00232
BRCASCGB2A2 →+2.952+0.450<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,228 associations by consensus.

FAM174A vs ELL2 — BRCA

Per-sample scatter of FAM174A vs ELL2 in BRCA (Pearson r = 0.30).

Explore this scatter interactively →

Exploration