FAM171A2

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, FAM171A2 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,684 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible FAM171A2-associated GO terms across cancer lineages are Protein-DNA complex organization, Positive regulation of double-strand break repair, and Transcription initiation at RNA polymerase II promoter. Each is linked with FAM171A2 in more than 16 cancer types. Because this analysis shows association rather than direction, both FAM171A2-to-partner and partner-to-FAM171A2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Protein-DNA complex organization grouped by FAM171A2-low versus FAM171A2-high in BONE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM171A2→partner) and Y-score (partner→FAM171A2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BONEProtein-DNA complex organization →+0.105+2.022<.001<.001317
BONEPositive regulation of double-strand break repair →+0.102+1.511<.001<.001317
BONETranscription initiation at RNA polymerase II promoter →+0.079+1.496<.001<.001317
BONEProtein-DNA complex assembly →+0.090+1.776<.001<.001317
BONEtRNA transcription →+0.132+1.751.002<.001316
STOMACHRegulation of DNA-templated transcription initiation →+0.056+1.362<.001.002316
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,684 associations by consensus.

Protein-DNA complex organization by FAM171A2 expression — BONE

Box plot of Protein-DNA complex organization in FAM171A2-low vs FAM171A2-high samples in BONE.

Explore this box plot interactively →

Exploration