FAM171A1

Across TCGA cell cohorts, FAM171A1 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,800 significant associations in total. BREAST shows the largest number of these associations.

The most reproducible FAM171A1-associated GO terms across cancer lineages are Transport of virus, Intracellular transport of virus, and Regulation of opsin-mediated signaling pathway. Each is linked with FAM171A1 in more than 13 cancer types. Because this analysis shows association rather than direction, both FAM171A1-to-partner and partner-to-FAM171A1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Transport of virus grouped by FAM171A1-low versus FAM171A1-high in LUNG_NSCLC_LUSC.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM171A1→partner) and Y-score (partner→FAM171A1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUNG_NSCLC_LUSC	Transport of virus →	+0.185	+2.107	<.001	<.001	3	14
LUNG_NSCLC_LUSC	Intracellular transport of virus →	+0.185	+2.107	<.001	<.001	3	14
LUNG_NSCLC_LUSC	Regulation of opsin-mediated signaling pathway →	+0.217	+2.205	<.001	<.001	3	12
UPPER_AERODIGESTIVE_TRACT	DNA-templated transcription initiation →	+0.070	+1.788	<.001	<.001	3	11
UPPER_AERODIGESTIVE_TRACT	Transcription initiation at RNA polymerase II promoter →	+0.066	+1.972	<.001	<.001	3	10
SOFT_TISSUE	Lipoprotein biosynthetic process →	+0.068	+1.221	<.001	<.001	3	10

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,800 associations by consensus.

Transport of virus by FAM171A1 expression — LUNG_NSCLC_LUSC

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