FAM162A

Across TCGA patient cohorts, FAM162A protein abundance is significantly associated with the RNA expression of many other genes, with 13,982 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible FAM162A-associated genes across cancer lineages are SMCHD1, C7, and PLCL1. Each is linked with FAM162A in more than 3 cancer types. Because this analysis shows association rather than direction, both FAM162A-to-partner and partner-to-FAM162A results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, FAM162A versus SMCHD1 in COAD, with a Pearson correlation of -0.43.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM162A→partner) and Y-score (partner→FAM162A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
COAD	SMCHD1 →	-0.640	-0.509	<.001	<.001	3	4
UCEC	C7 →	-1.965	-0.727	<.001	<.001	3	4
CCRCC	PLCL1 →	-0.743	-0.422	<.001	<.001	3	4
OV	CNTRL →	-0.741	-0.347	<.001	.009	3	4
UCEC	GYPC →	-0.591	-0.406	.001	<.001	3	4
LSCC	AK4 →	+1.210	+0.735	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 13,982 associations by consensus.

FAM162A vs SMCHD1 — COAD

Explore this scatter interactively →