FAM135A-AS1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, FAM135A-AS1 RNA differs between tumor and matched normal tissue in 10 of 18 cancer types tested, making tumor–normal expression one of FAM135A-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in lung squamous cell carcinoma (LUSC), where FAM135A-AS1 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types FAM135A-AS1 is over-expressed in tumor.

LUSC, LIHC, and COAD are the cancer types where FAM135A-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in FAM135A-AS1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
LUSCAllII,III,IV+0.262<.0016view →
LIHCMaleAll+0.122<.0016view →
COADAllAll+0.240<.0015view →
THCAMaleIV+0.210.0085view →
STADAllII,III,IV+0.338<.0014view →
HNSCMaleAll+0.125.0054view →
READAllAll+0.413.0033view →
ESCAAllII,III,IV+0.339.0302view →
UCECAllAll+0.218.0272view →
CHOLAllAll+0.333.0301view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 10 strongest of 10 lineages.

Exploration