FAM118A

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM118A mutation is significantly associated with the total protein of many other genes, with 9 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FAM118A-associated genes across cancer lineages are HER3, Acetyl-a-Tubulin-Lys40, and MEK1. Each is linked with FAM118A in more than 1 cancer types. Because this analysis shows association rather than direction, both FAM118A-to-partner and partner-to-FAM118A results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, HER3 grouped by FAM118A-low versus FAM118A-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM118A→partner) and Y-score (partner→FAM118A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECHER3 →+0.471+2.820<.001.03531
UCECAcetyl-a-Tubulin-Lys40 →+0.478+3.331.043.00531
UCECMEK1 →+0.498+3.459.003.00531
UCECMyosin-IIa_pS1943 →+0.282+2.598.003.00631
UCECNotch1 →+0.182+3.700.005.00131
UCECp62 Lck ligand →+0.466+3.594.002.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 9 associations by consensus.

HER3 by FAM118A expression — UCEC

Box plot of HER3 in FAM118A-low vs FAM118A-high samples in UCEC.

Explore this box plot interactively →

Exploration