FAM117B

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM117B mutation is significantly associated with the RNA expression of many other genes, with 3,299 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FAM117B-associated genes across cancer lineages are FBXO7, SF3A2, and SGTA. Each is linked with FAM117B in more than 1 cancer types. Because this analysis shows association rather than direction, both FAM117B-to-partner and partner-to-FAM117B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, FBXO7 grouped by FAM117B-low versus FAM117B-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM117B→partner) and Y-score (partner→FAM117B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECFBXO7 →+0.469+2.158<.001<.00132
UCECSF3A2 →+0.369+2.169.003<.00132
UCECSGTA →+0.505+2.158<.001<.00132
UCECHPS1 →+0.382+2.839<.001.00132
UCECHPS5 →+0.446+1.839<.001.00232
UCECPFDN1 →+0.355+2.201<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,299 associations by consensus.

FBXO7 by FAM117B expression — UCEC

Box plot of FBXO7 in FAM117B-low vs FAM117B-high samples in UCEC.

Explore this box plot interactively →

Exploration