FAM117B

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, FAM117B RNA expression is significantly associated with the go_rna of many other GO terms, with 6,295 significant associations in total. BONE shows the largest number of these associations.

The most reproducible FAM117B-associated GO terms across cancer lineages are Positive regulation of DNA repair, Urokinase plasminogen activator signaling pathway, and Host-mediated perturbation of viral transcription. Each is linked with FAM117B in more than 14 cancer types. Because this analysis shows association rather than direction, both FAM117B-to-partner and partner-to-FAM117B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Positive regulation of DNA repair grouped by FAM117B-low versus FAM117B-high in SOFT_TISSUE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM117B→partner) and Y-score (partner→FAM117B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SOFT_TISSUEPositive regulation of DNA repair →+0.084+0.866<.001<.001315
LIVERUrokinase plasminogen activator signaling pathway →-1.402-0.855.001<.001313
SOFT_TISSUEHost-mediated perturbation of viral transcription →+0.093+0.726.001.001313
STOMACHHost-mediated activation of viral transcription →+0.099+0.827.001.004313
LUNG_SCLCPositive regulation of calcium ion transport into cytosol →-0.338-0.691.002<.001313
SOFT_TISSUEExternal encapsulating structure organization →-0.172-0.766<.001<.001313
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,295 associations by consensus.

Positive regulation of DNA repair by FAM117B expression — SOFT_TISSUE

Box plot of Positive regulation of DNA repair in FAM117B-low vs FAM117B-high samples in SOFT_TISSUE.

Explore this box plot interactively →

Exploration