FAM114A2

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, FAM114A2 mutation is significantly associated with the RNA expression of many other genes, with 12 significant associations in total. LUNG_NSCLC_LUAD shows the largest number of these associations.

The most reproducible FAM114A2-associated genes across cancer lineages are R3HDML, CABP5, and BANF2. Each is linked with FAM114A2 in more than 1 cancer types. Because this analysis shows association rather than direction, both FAM114A2-to-partner and partner-to-FAM114A2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, R3HDML grouped by FAM114A2-low versus FAM114A2-high in BLOOD_Lymphoma.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM114A2→partner) and Y-score (partner→FAM114A2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaR3HDML →+0.006+5.209<.001.00531
BLOOD_LymphomaCABP5 →+0.016+4.867<.001.00931
BLOOD_LymphomaBANF2 →+0.047+5.643<.001.00231
LARGE_INTESTINERFPL3 →+0.058+4.095<.001.00931
LARGE_INTESTINEFCGR3B →+0.174+4.467<.001.00431
LARGE_INTESTINEKRTAP10-1 →+0.009+4.415<.001.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 12 associations by consensus.

R3HDML by FAM114A2 expression — BLOOD_Lymphoma

Box plot of R3HDML in FAM114A2-low vs FAM114A2-high samples in BLOOD_Lymphoma.

Explore this box plot interactively →

Exploration