FAM107A

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM107A mutation is significantly associated with the total protein of many other genes, with 19 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FAM107A-associated genes across cancer lineages are C-Raf, A-Raf_pS299, and Heregulin. Each is linked with FAM107A in more than 1 cancer types. Because this analysis shows association rather than direction, both FAM107A-to-partner and partner-to-FAM107A results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, C-Raf grouped by FAM107A-low versus FAM107A-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM107A→partner) and Y-score (partner→FAM107A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECC-Raf →+0.186+2.321.007.03432
UCECA-Raf_pS299 →-0.211-3.000<.001.03631
UCECHeregulin →-0.176-2.321.003.03431
UCECMyosin-IIa_pS1943 →+0.269+2.472.007.01131
UCECN-Ras →-0.172-2.973.002.03531
UCECp27 →+0.214+3.169.042.01931
Each partner links to its Q-omics profile. Showing the 6 strongest of 19 associations by consensus.

C-Raf by FAM107A expression — UCEC

Box plot of C-Raf in FAM107A-low vs FAM107A-high samples in UCEC.

Explore this box plot interactively →

Exploration