FAIM

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, FAIM RNA expression is significantly associated with the go_rna of many other GO terms, with 3,881 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible FAIM-associated GO terms across cancer lineages are Establishment of mitotic sister chromatid cohesion, Regulation of metaphase/anaphase transition of cell cycle, and Regulation of mitotic spindle checkpoint. Each is linked with FAIM in more than 10 cancer types. Because this analysis shows association rather than direction, both FAIM-to-partner and partner-to-FAIM results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Establishment of mitotic sister chromatid cohesion grouped by FAIM-low versus FAIM-high in UPPER_AERODIGESTIVE_TRACT.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (FAIM→partner) and Y-score (partner→FAIM) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UPPER_AERODIGESTIVE_TRACTEstablishment of mitotic sister chromatid cohesion →+0.167+1.193<.001<.001311
UPPER_AERODIGESTIVE_TRACTRegulation of metaphase/anaphase transition of cell cycle →+0.102+1.315.003.00139
BLOOD_LeukemiaRegulation of mitotic spindle checkpoint →+0.103+2.357<.001<.00139
PANCREASRegulation of chromosome separation →+0.103+0.804.001<.00139
UPPER_AERODIGESTIVE_TRACTRegulation of mitotic metaphase/anaphase transition →+0.100+1.197.004.00239
UPPER_AERODIGESTIVE_TRACTRegulation of sister chromatid segregation →+0.096+1.006.005.00839
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,881 associations by consensus.

Establishment of mitotic sister chromatid cohesion by FAIM expression — UPPER_AERODIGESTIVE_TRACT

Box plot of Establishment of mitotic sister chromatid cohesion in FAIM-low vs FAIM-high samples in UPPER_AERODIGESTIVE_TRACT.

Explore this box plot interactively →

Exploration