FAH

Across TCGA pan-cancer cohorts, FAH mass-spec protein differs between tumor and matched normal tissue in 6 of 18 cancer types tested, making tumor–normal expression one of FAH’s most consistent transcriptional readouts.

The strongest signal is observed in head and neck squamous cell carcinoma (HNSC), where FAH mass-spec protein is repressed in tumor relative to normal tissue. In most cancer types FAH is over-expressed in tumor, although a few such as HNSC and COAD show the opposite, repressed pattern.

HNSC, COAD, and CCRCC are the cancer types where FAH tumor–normal differential expression is most reproducible.

mass-spec protein tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in FAH mass-spec protein (log₂); positive values indicate higher expression in tumor. p-values are from the differential-expression test.

Lineage	Gender	Stage	Fold-change	p	Sampling consensus
HNSC	Male	All	−0.544	<.001	11	view →
COAD	Female	II,III,IV	−0.505	<.001	10	view →
CCRCC	Male	All	−0.613	<.001	9	view →
LSCC	Male	All	−0.548	<.001	8	view →
LUAD	Male	All	−0.348	<.001	8	view →
PDAC	All	II,III,IV	+0.288	.005	4	view →

Pink = over-expressed in tumor, green = repressed in tumor. Showing the 6 strongest of 6 lineages.

FAH–HNSC

Open the HNSC breakdown →