FAF2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAF2 protein abundance is significantly associated with the RNA expression of many other genes, with 11,877 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible FAF2-associated genes across cancer lineages are CNOT6, B4GALT7, and TTC1. Each is linked with FAF2 in more than 4 cancer types. Because this analysis shows association rather than direction, both FAF2-to-partner and partner-to-FAF2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, FAF2 versus CNOT6 in OV, with a Pearson correlation of 0.40.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAF2→partner) and Y-score (partner→FAF2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVCNOT6 →+0.707+0.265.004<.00135
LUADB4GALT7 →+0.596+0.349<.001<.00135
LUADTTC1 →+0.544+0.389<.001<.00135
OVERGIC1 →+0.741+0.304<.001<.00135
OVKIAA1191 →+0.582+0.240<.001<.00135
OVCANX →+0.754+0.310<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,877 associations by consensus.

FAF2 vs CNOT6 — OV

Per-sample scatter of FAF2 vs CNOT6 in OV (Pearson r = 0.40).

Explore this scatter interactively →

Exploration