F7

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, F7 protein abundance is significantly associated with the RNA expression of many other genes, with 6,627 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible F7-associated genes across cancer lineages are CD93, DLL4, and LYVE1. Each is linked with F7 in more than 4 cancer types. Because this analysis shows association rather than direction, both F7-to-partner and partner-to-F7 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, F7 versus CD93 in GBM, with a Pearson correlation of 0.39.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (F7→partner) and Y-score (partner→F7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMCD93 →+0.938+0.675<.001<.00135
LSCCDLL4 →+0.749+0.460<.001<.00135
GBMLYVE1 →+1.021+0.515.004<.00135
CCRCCDIPK2B →+0.758+0.341.001.00635
CCRCCMCAM →+0.763+0.392<.001.00235
GBMMEDAG →+1.052+0.597<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,627 associations by consensus.

F7 vs CD93 — GBM

Per-sample scatter of F7 vs CD93 in GBM (Pearson r = 0.39).

Explore this scatter interactively →

Exploration