ETFBKMT

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ETFBKMT protein abundance is significantly associated with the RNA expression of many other genes, with 291 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible ETFBKMT-associated genes across cancer lineages are NOS2P2, TMEM239, and SNORD115-23. Each is linked with ETFBKMT in more than 1 cancer types. Because this analysis shows association rather than direction, both ETFBKMT-to-partner and partner-to-ETFBKMT results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, ETFBKMT versus NOS2P2 in CCRCC, with a Pearson correlation of 0.82.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ETFBKMT→partner) and Y-score (partner→ETFBKMT) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CCRCCNOS2P2 →+0.083+0.748<.001.00531
CCRCCTMEM239 →+0.056+0.748.001.00522
CCRCCSNORD115-23 →+1.100+0.748.001.00531
CCRCCTRBV11-1 →+0.610+0.794.004.00831
CCRCCIGHJ2 →+1.490+0.748.001.00531
CCRCCHNRNPA3P6 →+0.630+0.794.003.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 291 associations by consensus.

ETFBKMT vs NOS2P2 — CCRCC

Per-sample scatter of ETFBKMT vs NOS2P2 in CCRCC (Pearson r = 0.82).

Explore this scatter interactively →

Exploration