ESPNL

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ESPNL mutation is significantly associated with the RNA expression of many other genes, with 59 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible ESPNL-associated genes across cancer lineages are OR12D2, SLC4A1, and TEX13B. Each is linked with ESPNL in more than 1 cancer types. Because this analysis shows association rather than direction, both ESPNL-to-partner and partner-to-ESPNL results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OR12D2 grouped by ESPNL-low versus ESPNL-high in SOFT_TISSUE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ESPNL→partner) and Y-score (partner→ESPNL) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SOFT_TISSUEOR12D2 →+0.030+3.635<.001.00732
LARGE_INTESTINESLC4A1 →+0.032+3.144.001.00132
LUNG_SCLCTEX13B →+0.128+3.710<.001.00832
LUNG_SCLCGAGE12H →+1.759+4.070<.001.00332
LUNG_NSCLC_LUADANKRD34C →+0.043+3.628.004.00232
SOFT_TISSUEOR5AC1 →+0.010+4.392<.001.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 59 associations by consensus.

OR12D2 by ESPNL expression — SOFT_TISSUE

Box plot of OR12D2 in ESPNL-low vs ESPNL-high samples in SOFT_TISSUE.

Explore this box plot interactively →

Exploration