ERGIC3

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ERGIC3 RNA expression is significantly associated with the go_rna of many other GO terms, with 2,687 significant associations in total. CNS shows the largest number of these associations.

The most reproducible ERGIC3-associated GO terms across cancer lineages are Attachment of GPI anchor to protein, Response to topologically incorrect protein, and Response to unfolded protein. Each is linked with ERGIC3 in more than 14 cancer types. Because this analysis shows association rather than direction, both ERGIC3-to-partner and partner-to-ERGIC3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Attachment of GPI anchor to protein grouped by ERGIC3-low versus ERGIC3-high in CNS.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (ERGIC3→partner) and Y-score (partner→ERGIC3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CNSAttachment of GPI anchor to protein →+0.134+0.623<.001<.001315
PANCREASResponse to topologically incorrect protein →+0.092+0.495.002<.001214
PANCREASResponse to unfolded protein →+0.104+0.416.001<.001213
PANCREASEndoplasmic reticulum unfolded protein response →+0.097+0.307.001.003312
BONEPositive regulation of retrograde protein transport, ER to cytosol →+0.121+0.496.004.008212
LUNG_NSCLC_LUSCProtein targeting to vacuole involved in autophagy →+0.182+0.618<.001.006311
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,687 associations by consensus.

Attachment of GPI anchor to protein by ERGIC3 expression — CNS

Box plot of Attachment of GPI anchor to protein in ERGIC3-low vs ERGIC3-high samples in CNS.

Explore this box plot interactively →

Exploration