EPHB6

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, EPHB6 RNA expression is significantly associated with the protein abundance of many other proteins, with 19,547 significant associations in total. GBM shows the largest number of these associations.

The most reproducible EPHB6-associated proteins across cancer lineages are CRMP1, SNCG, and ENPP4. Each is linked with EPHB6 in more than 4 cancer types. Because this analysis shows association rather than direction, both EPHB6-to-partner and partner-to-EPHB6 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, EPHB6 versus CRMP1 in LSCC, with a Pearson correlation of 0.38.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (EPHB6→partner) and Y-score (partner→EPHB6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCCRMP1 →+0.862+1.062<.001<.00135
UCECSNCG →+1.082+0.697<.001.00634
BRCAENPP4 →-0.474-1.235<.001<.00134
CCRCCTMF1 →-0.267-0.543<.001<.00134
UCECTWF1 →-0.377-0.929<.001<.00134
UCECCNRIP1 →+0.722+0.713<.001.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 19,547 associations by consensus.

EPHB6 vs CRMP1 — LSCC

Per-sample scatter of EPHB6 vs CRMP1 in LSCC (Pearson r = 0.38).

Explore this scatter interactively →

Exploration