EMC6

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, EMC6 mutation is significantly associated with the RNA expression of many other genes, with 23 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible EMC6-associated genes across cancer lineages are SMIM12P1, F8A2, and MLECP1. Each is linked with EMC6 in more than 1 cancer types. Because this analysis shows association rather than direction, both EMC6-to-partner and partner-to-EMC6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SMIM12P1 grouped by EMC6-low versus EMC6-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (EMC6→partner) and Y-score (partner→EMC6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECSMIM12P1 →+0.474+4.398.003.00631
UCECF8A2 →+0.072+4.694<.001.00731
UCECMLECP1 →+0.108+5.226.005.00331
UCECKRTAP23-1 →+0.628+5.302<.001.00131
UCECRNU4-51P →+0.575+4.936.006.00231
UCECRNU6-366P →+0.532+5.226<.001.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 23 associations by consensus.

SMIM12P1 by EMC6 expression — UCEC

Box plot of SMIM12P1 in EMC6-low vs EMC6-high samples in UCEC.

Explore this box plot interactively →

Exploration