ELOA

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, ELOA RNA differs between tumor and matched normal tissue in 11 of 18 cancer types tested, making tumor–normal expression one of ELOA’s most consistent transcriptional readouts.

The strongest signal is observed in kidney chromophobe (KICH), where ELOA RNA is repressed in tumor relative to normal tissue. In most cancer types ELOA is over-expressed in tumor, although a few such as KICH and THCA show the opposite, repressed pattern.

KICH, BLCA, and THCA are the cancer types where ELOA tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in ELOA RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KICHFemaleAll−1.253<.00110view →
BLCAMaleIII,IV+0.820<.0019view →
THCAMaleIII,IV−0.692<.0019view →
LUADAllII,III,IV−0.450<.0018view →
HNSCMaleAll+0.430<.0018view →
KIRPMaleAll−0.491<.0012view →
PRADAllAll+0.277.0022view →
KIRCMaleII,III,IV−0.243.0242view →
LIHCAllAll+0.224.0182view →
LUSCAllAll−0.195.0122view →
STADMaleII,III,IV+0.458.0451view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 11 strongest of 11 lineages.

ELOA–KICH

Tumor-vs-normal expression box plot for ELOA RNA in KICH.

Open the KICH breakdown →

Exploration