EIF3D

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, EIF3D protein abundance is significantly associated with the RNA expression of many other genes, with 15,483 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible EIF3D-associated genes across cancer lineages are CXCR1, CXCR2, and CSF3R. Each is linked with EIF3D in more than 7 cancer types. Because this analysis shows association rather than direction, both EIF3D-to-partner and partner-to-EIF3D results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, EIF3D versus CXCR1 in PDAC, with a Pearson correlation of -0.60.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (EIF3D→partner) and Y-score (partner→EIF3D) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACCXCR1 →-1.010-0.155<.001<.00138
GBMCXCR2 →-0.957-0.151<.001.00128
UCECCSF3R →-1.207-0.215<.001<.00136
BRCAACKR1 →-1.735-0.184<.001<.00136
UCECRAPGEF3 →-0.808-0.123<.001.00936
BRCALYVE1 →-1.403-0.191<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 15,483 associations by consensus.

EIF3D vs CXCR1 — PDAC

Per-sample scatter of EIF3D vs CXCR1 in PDAC (Pearson r = -0.60).

Explore this scatter interactively →

Exploration