EIF3C

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, EIF3C mutation is significantly associated with the RNA expression of many other genes, with 240 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible EIF3C-associated genes across cancer lineages are OR2B11, HTN1, and SPINK9. Each is linked with EIF3C in more than 1 cancer types. Because this analysis shows association rather than direction, both EIF3C-to-partner and partner-to-EIF3C results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (EIF3C→partner) and Y-score (partner→EIF3C) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PANCREASOR2B11 →+0.024+3.869<.001.00232
BREASTHTN1 →+0.068+2.990<.001.00732
CNSSPINK9 →+0.052+4.321<.001<.00132
STOMACHSEBOX →+0.054+4.044<.001.00332
LARGE_INTESTINEST13 →+0.428+3.459.006.00132
LARGE_INTESTINESRF →+0.547+2.244<.001.00332
Each partner links to its Q-omics profile. Showing the 6 strongest of 240 associations by consensus.

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