EIF3B

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, EIF3B RNA expression is significantly associated with the go_rna of many other GO terms, with 4,280 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible EIF3B-associated GO terms across cancer lineages are Transcription by RNA polymerase I, Transcription initiation at RNA polymerase I promoter, and Endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Each is linked with EIF3B in more than 17 cancer types. Because this analysis shows association rather than direction, both EIF3B-to-partner and partner-to-EIF3B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Transcription by RNA polymerase I grouped by EIF3B-low versus EIF3B-high in PANCREAS.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (EIF3B→partner) and Y-score (partner→EIF3B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PANCREASTranscription by RNA polymerase I →+0.121+0.904<.001<.001317
SOFT_TISSUETranscription initiation at RNA polymerase I promoter →+0.139+0.967<.001<.001317
LUNG_NSCLC_LUSCEndonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) →+0.150+0.701.005.003218
LUNG_NSCLC_LUSCrRNA 5'-end processing →+0.150+0.701.005.003218
SOFT_TISSUEDNA-templated transcription termination →+0.094+0.776.003.003317
OESOPHAGUSMaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) →+0.167+1.253<.001<.001316
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,280 associations by consensus.

Transcription by RNA polymerase I by EIF3B expression — PANCREAS

Box plot of Transcription by RNA polymerase I in EIF3B-low vs EIF3B-high samples in PANCREAS.

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Exploration