EFR3B

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, EFR3B mutation is significantly associated with the RNA expression of many other genes, with 3,675 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible EFR3B-associated genes across cancer lineages are ABHD17B, STIL, and SLF1. Each is linked with EFR3B in more than 1 cancer types. Because this analysis shows association rather than direction, both EFR3B-to-partner and partner-to-EFR3B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ABHD17B grouped by EFR3B-low versus EFR3B-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (EFR3B→partner) and Y-score (partner→EFR3B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADABHD17B →+0.489+3.348.004.00532
COADSTIL →+0.560+3.335.005.00532
UCECSLF1 →+0.581+2.523<.001<.00132
UCECISCA1 →+0.520+2.938<.001<.00132
COADCTDSPL2 →+0.549+3.348.006.00532
COADGSTCD →+0.573+3.335.001.00532
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,675 associations by consensus.

ABHD17B by EFR3B expression — COAD

Box plot of ABHD17B in EFR3B-low vs EFR3B-high samples in COAD.

Explore this box plot interactively →

Exploration