EFNB2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, EFNB2 protein abundance is significantly associated with the RNA expression of many other genes, with 12,437 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible EFNB2-associated genes across cancer lineages are ARGLU1, SLAMF7, and IL2RB. Each is linked with EFNB2 in more than 4 cancer types. Because this analysis shows association rather than direction, both EFNB2-to-partner and partner-to-EFNB2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, EFNB2 versus ARGLU1 in BRCA, with a Pearson correlation of 0.34.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (EFNB2→partner) and Y-score (partner→EFNB2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAARGLU1 →+0.780+0.751<.001.00135
UCECSLAMF7 →-0.994-0.524.004.00835
UCECIL2RB →-0.721-0.554.002.00634
GBMZFYVE21 →+0.535+0.513.001<.00134
HNSCPIM2 →-1.051-0.465<.001<.00134
BRCAACVR2A →+0.532+0.745<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,437 associations by consensus.

EFNB2 vs ARGLU1 — BRCA

Per-sample scatter of EFNB2 vs ARGLU1 in BRCA (Pearson r = 0.34).

Explore this scatter interactively →

Exploration