EFNA4

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, EFNA4 RNA expression is significantly associated with the protein abundance of many other proteins, with 15,950 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible EFNA4-associated proteins across cancer lineages are GIMAP8, HSPA14, and PSME2. Each is linked with EFNA4 in more than 5 cancer types. Because this analysis shows association rather than direction, both EFNA4-to-partner and partner-to-EFNA4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, EFNA4 versus GIMAP8 in HNSC, with a Pearson correlation of -0.28.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (EFNA4→partner) and Y-score (partner→EFNA4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCGIMAP8 →-0.489-0.728<.001.00136
BRCAHSPA14 →+0.315+0.818.002.00236
OVPSME2 →-0.405-0.535<.001<.00135
PDACDCAF7 →+0.363+0.680<.001<.00135
OVGGPS1 →+0.387+0.503.001.00235
LSCCGIMAP7 →-0.592-0.703<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 15,950 associations by consensus.

EFNA4 vs GIMAP8 — HNSC

Per-sample scatter of EFNA4 vs GIMAP8 in HNSC (Pearson r = -0.28).

Explore this scatter interactively →

Exploration