EFHC1

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, EFHC1 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,965 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible EFHC1-associated GO terms across cancer lineages are Intraciliary anterograde transport, Protein localization to cilium, and Regulation of cilium assembly. Each is linked with EFHC1 in more than 15 cancer types. Because this analysis shows association rather than direction, both EFHC1-to-partner and partner-to-EFHC1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Intraciliary anterograde transport grouped by EFHC1-low versus EFHC1-high in LUNG_SCLC.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (EFHC1→partner) and Y-score (partner→EFHC1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_SCLCIntraciliary anterograde transport →+0.115+1.306<.001<.001316
LUNG_SCLCProtein localization to cilium →+0.053+1.013<.001<.001315
KIDNEYRegulation of cilium assembly →+0.063+1.019<.001.001313
LIVERNon-motile cilium assembly →+0.087+1.381<.001<.001313
UPPER_AERODIGESTIVE_TRACTProtein localization to vacuole →+0.097+1.256<.001<.001312
STOMACHGolgi to plasma membrane transport →+0.081+1.184<.001.001312
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,965 associations by consensus.

Intraciliary anterograde transport by EFHC1 expression — LUNG_SCLC

Box plot of Intraciliary anterograde transport in EFHC1-low vs EFHC1-high samples in LUNG_SCLC.

Explore this box plot interactively →

Exploration