EFCAB9

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, EFCAB9 RNA expression is significantly associated with the protein abundance of many other proteins, with 6,807 significant associations in total. GBM shows the largest number of these associations.

The most reproducible EFCAB9-associated proteins across cancer lineages are NSD1_S483, NSD3_S457, and ARHGAP35_S1179. Each is linked with EFCAB9 in more than 2 cancer types. Because this analysis shows association rather than direction, both EFCAB9-to-partner and partner-to-EFCAB9 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (EFCAB9→partner) and Y-score (partner→EFCAB9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCNSD1_S483 →+0.443+0.129.001.00233
PDACNSD3_S457 →-0.407-0.178<.001<.00133
PDACARHGAP35_S1179 →+0.399+0.177<.001<.00133
CCRCCBUD13_S235 →-0.946-0.471.005.00233
PDACCIR1_S394 →-0.839-0.245<.001<.00133
PDACCOPA_S402 →-1.082-0.232<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,807 associations by consensus.

Exploration