EFCAB5

Across TCGA patient cohorts, EFCAB5 RNA expression is significantly associated with the RNA expression of many other genes, with 19,907 significant associations in total. UVM shows the largest number of these associations.

The most reproducible EFCAB5-associated genes across cancer lineages are SSH2, CNTRL, and USP49. Each is linked with EFCAB5 in more than 29 cancer types. Because this analysis shows association rather than direction, both EFCAB5-to-partner and partner-to-EFCAB5 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, EFCAB5 versus SSH2 in THYM, with a Pearson correlation of 0.70.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (EFCAB5→partner) and Y-score (partner→EFCAB5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
THYM	SSH2 →	+1.130	+0.342	<.001	<.001	3	30
THYM	CNTRL →	+1.089	+0.321	<.001	<.001	3	28
UVM	USP49 →	+1.004	+1.026	<.001	<.001	3	27
SCLC	RFX3 →	+0.867	+0.328	<.001	<.001	3	27
UVM	CLHC1 →	+0.955	+1.060	<.001	<.001	3	27
UVM	KHDC4 →	+1.011	+0.990	<.001	<.001	3	27

Each partner links to its Q-omics profile. Showing the 6 strongest of 19,907 associations by consensus.

EFCAB5 vs SSH2 — THYM

Explore this scatter interactively →