EDF1

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, EDF1 RNA expression is significantly associated with the go_rna of many other GO terms, with 2,551 significant associations in total. CNS shows the largest number of these associations.

The most reproducible EDF1-associated GO terms across cancer lineages are Dolichol phosphate mannose biosynthetic process, Dolichyl monophosphate biosynthetic process, and Proteasome regulatory particle assembly. Each is linked with EDF1 in more than 10 cancer types. Because this analysis shows association rather than direction, both EDF1-to-partner and partner-to-EDF1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Dolichol phosphate mannose biosynthetic process grouped by EDF1-low versus EDF1-high in CNS.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (EDF1→partner) and Y-score (partner→EDF1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CNSDolichol phosphate mannose biosynthetic process →+0.056+0.275<.001.009311
LUNG_NSCLC_LUSCDolichyl monophosphate biosynthetic process →+0.127+0.821.005.007111
SOFT_TISSUEProteasome regulatory particle assembly →+0.106+0.546<.001.00139
SOFT_TISSUEPeptidyl-glycine modification →+0.172+0.758<.001<.00138
SOFT_TISSUEMitochondrial RNA 3'-end processing →-0.072-0.523.005<.00138
BREASTCTP salvage →+0.149+0.906<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,551 associations by consensus.

Dolichol phosphate mannose biosynthetic process by EDF1 expression — CNS

Box plot of Dolichol phosphate mannose biosynthetic process in EDF1-low vs EDF1-high samples in CNS.

Explore this box plot interactively →

Exploration