EDC3

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, EDC3 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,132 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible EDC3-associated GO terms across cancer lineages are Regulation of DNA-templated transcription initiation, Deadenylation-independent decapping of nuclear-transcribed mRNA, and Negative regulation of transcription initiation by RNA polymerase II. Each is linked with EDC3 in more than 17 cancer types. Because this analysis shows association rather than direction, both EDC3-to-partner and partner-to-EDC3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of DNA-templated transcription initiation grouped by EDC3-low versus EDC3-high in SOFT_TISSUE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (EDC3→partner) and Y-score (partner→EDC3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SOFT_TISSUERegulation of DNA-templated transcription initiation →+0.071+0.763<.001.002318
UPPER_AERODIGESTIVE_TRACTDeadenylation-independent decapping of nuclear-transcribed mRNA →+0.139+0.755<.001<.001318
PANCREASNegative regulation of transcription initiation by RNA polymerase II →+0.127+0.966<.001<.001317
PANCREASNegative regulation of DNA-templated transcription initiation →+0.127+0.966<.001<.001317
PANCREASPositive regulation of DNA-templated transcription initiation →+0.078+1.011<.001<.001317
BONEEpigenetic regulation of gene expression →+0.085+0.893.001.002317
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,132 associations by consensus.

Regulation of DNA-templated transcription initiation by EDC3 expression — SOFT_TISSUE

Box plot of Regulation of DNA-templated transcription initiation in EDC3-low vs EDC3-high samples in SOFT_TISSUE.

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Exploration