ECSIT

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ECSIT mutation is significantly associated with the RNA expression of many other genes, with 10 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible ECSIT-associated genes across cancer lineages are HRG, TMEM244, and PNLIPRP3. Each is linked with ECSIT in more than 1 cancer types. Because this analysis shows association rather than direction, both ECSIT-to-partner and partner-to-ECSIT results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, HRG grouped by ECSIT-low versus ECSIT-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ECSIT→partner) and Y-score (partner→ECSIT) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaHRG →+0.402+3.855<.001.00731
BLOOD_LeukemiaTMEM244 →+0.271+3.551<.001.00931
BLOOD_LeukemiaPNLIPRP3 →+0.008+3.551.007.00931
BLOOD_LeukemiaCFHR2 →+0.245+5.124<.001<.00131
LARGE_INTESTINERASGEF1C →+0.245+3.333.001.00931
LARGE_INTESTINESLC25A31 →+0.062+3.115<.001.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 10 associations by consensus.

HRG by ECSIT expression — BLOOD_Leukemia

Box plot of HRG in ECSIT-low vs ECSIT-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration