EBF4

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, EBF4 protein abundance is significantly associated with the RNA expression of many other genes, with 196 significant associations in total. OV shows the largest number of these associations.

The most reproducible EBF4-associated genes across cancer lineages are HDGFL1, KCNK17, and RTP3. Each is linked with EBF4 in more than 1 cancer types. Because this analysis shows association rather than direction, both EBF4-to-partner and partner-to-EBF4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, EBF4 versus HDGFL1 in UCEC, with a Pearson correlation of 0.45.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (EBF4→partner) and Y-score (partner→EBF4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECHDGFL1 →+0.209+0.479.001.00831
UCECKCNK17 →+0.751+0.541.005.00131
UCECRTP3 →+1.069+0.482.007.00731
UCECGABRD →+0.438+0.479<.001.00731
UCECPHBP1 →+0.152+0.516.003.00931
UCECCNN2P6 →+0.811+0.391.003.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 196 associations by consensus.

EBF4 vs HDGFL1 — UCEC

Per-sample scatter of EBF4 vs HDGFL1 in UCEC (Pearson r = 0.45).

Explore this scatter interactively →

Exploration