EAF1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, EAF1 RNA expression is significantly associated with the protein abundance of many other proteins, with 12,722 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible EAF1-associated proteins across cancer lineages are ANKRD28, SLC4A7_S84, and HMGN4. Each is linked with EAF1 in more than 6 cancer types. Because this analysis shows association rather than direction, both EAF1-to-partner and partner-to-EAF1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, EAF1 versus ANKRD28 in BRCA, with a Pearson correlation of 0.40.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (EAF1→partner) and Y-score (partner→EAF1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAANKRD28 →+0.286+0.575<.001<.00137
UCECSLC4A7_S84 →+0.625+0.327.001<.00135
UCECHMGN4 →-0.500-0.417.004.00435
GBMSCAF1_S874 →-0.427-0.269.002.00534
GBMACTR2 →+0.180+0.447<.001<.00134
COADC4BPB →+0.542+0.470.005<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,722 associations by consensus.

EAF1 vs ANKRD28 — BRCA

Per-sample scatter of EAF1 vs ANKRD28 in BRCA (Pearson r = 0.40).

Explore this scatter interactively →

Exploration