DYNC1I2

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, DYNC1I2 mutation is significantly associated with the RNA expression of many other genes, with 349 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible DYNC1I2-associated genes across cancer lineages are PPP2R5D, ATP5PB, and GLIPR2. Each is linked with DYNC1I2 in more than 1 cancer types. Because this analysis shows association rather than direction, both DYNC1I2-to-partner and partner-to-DYNC1I2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PPP2R5D grouped by DYNC1I2-low versus DYNC1I2-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DYNC1I2→partner) and Y-score (partner→DYNC1I2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEPPP2R5D →+0.675+3.212.002.00631
LARGE_INTESTINEATP5PB →+0.480+3.212.004.00631
LARGE_INTESTINEGLIPR2 →+1.140+3.212.002.00631
LARGE_INTESTINEALKBH7 →+0.463+3.212.005.00631
LARGE_INTESTINETNFSF9 →+1.669+3.212<.001.00631
LARGE_INTESTINESMPDL3B →+1.183+3.212.009.00631
Each partner links to its Q-omics profile. Showing the 6 strongest of 349 associations by consensus.

PPP2R5D by DYNC1I2 expression — LARGE_INTESTINE

Box plot of PPP2R5D in DYNC1I2-low vs DYNC1I2-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration