DSG4

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, DSG4 RNA expression is significantly associated with the go_rna of many other GO terms, with 469 significant associations in total. STOMACH shows the largest number of these associations.

The most reproducible DSG4-associated GO terms across cancer lineages are Response to flavonoid, Regulation of G protein-coupled receptor signaling pathway, and Intestinal lipid absorption. Each is linked with DSG4 in more than 3 cancer types. Because this analysis shows association rather than direction, both DSG4-to-partner and partner-to-DSG4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Response to flavonoid grouped by DSG4-low versus DSG4-high in STOMACH.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (DSG4→partner) and Y-score (partner→DSG4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STOMACHResponse to flavonoid →+0.090+0.147.009.00134
STOMACHRegulation of G protein-coupled receptor signaling pathway →-0.042-0.151.004.00134
LUNG_NSCLC_LUSCIntestinal lipid absorption →-0.312-0.208<.001.00833
LARGE_INTESTINECD27 signaling pathway →-0.252-0.547<.001.00133
LARGE_INTESTINENegative regulation of metallopeptidase activity →-0.373-0.678<.001<.00133
STOMACHHis-Purkinje system development →+0.341+0.136.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 469 associations by consensus.

Response to flavonoid by DSG4 expression — STOMACH

Box plot of Response to flavonoid in DSG4-low vs DSG4-high samples in STOMACH.

Explore this box plot interactively →

Exploration