DSG3

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, DSG3 protein abundance is significantly associated with the RNA expression of many other genes, with 19,206 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible DSG3-associated genes across cancer lineages are KRT16, KLF5, and DLX5. Each is linked with DSG3 in more than 4 cancer types. Because this analysis shows association rather than direction, both DSG3-to-partner and partner-to-DSG3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, DSG3 versus KRT16 in LSCC, with a Pearson correlation of 0.80.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DSG3→partner) and Y-score (partner→DSG3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCKRT16 →+3.302+1.681<.001<.00135
BRCAKLF5 →+1.454+1.183<.001<.00134
UCECDLX5 →+1.513+1.205.004.00734
BRCAPREX1 →-0.860-0.760.002<.00134
UCECDSC2 →+2.621+1.887<.001.00234
LSCCSPRR2D →+3.510+1.583<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 19,206 associations by consensus.

DSG3 vs KRT16 — LSCC

Per-sample scatter of DSG3 vs KRT16 in LSCC (Pearson r = 0.80).

Explore this scatter interactively →

Exploration