DSG1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, DSG1 protein abundance is significantly associated with the RNA expression of many other genes, with 10,502 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible DSG1-associated genes across cancer lineages are KRT17, DSC3, and PGLYRP3. Each is linked with DSG1 in more than 2 cancer types. Because this analysis shows association rather than direction, both DSG1-to-partner and partner-to-DSG1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, DSG1 versus KRT17 in LSCC, with a Pearson correlation of 0.50.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DSG1→partner) and Y-score (partner→DSG1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCKRT17 →+3.262+0.997<.001<.00133
BRCADSC3 →+2.885+1.457.001.00233
LSCCPGLYRP3 →+2.041+0.997<.001.00133
LSCCKRT16 →+3.866+0.992<.001.00133
BRCASERPINB5 →+2.903+1.412<.001.00433
LSCCATP5MC1P6 →+1.888+0.982<.001.00233
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,502 associations by consensus.

DSG1 vs KRT17 — LSCC

Per-sample scatter of DSG1 vs KRT17 in LSCC (Pearson r = 0.50).

Explore this scatter interactively →

Exploration